STRINGSTRING
Phatr31768 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31768" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31768Predicted protein (284 aa)    
Predicted Functional Partners:
TufA
Elongation factor Tu (426 aa)
   
  0.983
Phatr13682
Predicted protein; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (220 aa)
   
 
  0.929
Phatr15354
Predicted protein (300 aa)
   
 
  0.904
Phatr10847
Predicted protein (284 aa)
   
 
  0.904
Phatr14713
Predicted protein (137 aa)
   
 
  0.880
Phatr25375
Predicted protein (201 aa)
   
 
  0.876
Phatr9894
Predicted protein (140 aa)
   
 
  0.853
Phatr17519
Predicted protein (143 aa)
   
 
  0.848
Phatr10617
Predicted protein (229 aa)
   
 
  0.834
Phatr13361
Predicted protein (389 aa)
   
 
  0.827
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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