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Phatr31906 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31906" - Aldehyde dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31906Aldehyde dehydrogenase (551 aa)    
Predicted Functional Partners:
OAT
Ornithine aminotransferase (448 aa)
   
  0.960
P5CS
Delta l-pyrroline-5-carboxylate synthetase (747 aa)
       
  0.953
Phatr18027
Predicted protein (706 aa)
       
  0.953
PHATR_1155
Predicted protein (509 aa)
   
  0.946
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
 
  0.944
Phatr13951
Predicted protein (450 aa)
   
  0.943
Phatr51092
Glutamine synthetase (416 aa)
       
  0.943
Phatr45239
Predicted protein (1097 aa)
       
  0.935
GDCP
Glycine decarboxylase p-protein (1005 aa)
   
  0.924
AAT_2
Aspartate aminotransferase (426 aa)
     
  0.912
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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