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STRINGSTRING
Phatr31948 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31948" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31948Predicted protein (317 aa)    
Predicted Functional Partners:
Phatr19901
Predicted protein (900 aa)
   
 
  0.954
Phatr42282
Predicted protein (383 aa)
   
 
  0.937
Phatr25956
Predicted protein (272 aa)
   
  0.937
Phatr41875
Predicted protein (302 aa)
     
 
  0.848
Phatr15508
Predicted protein (461 aa)
           
  0.789
Phatr35253
Predicted protein (326 aa)
           
  0.776
Phatr27263
Predicted protein (196 aa)
           
  0.620
Phatr47067
Predicted protein (1237 aa)
     
   
  0.594
Phatr15688
Predicted protein (121 aa)
           
  0.590
Phatr47804
Predicted protein (94 aa)
           
  0.582
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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