STRINGSTRING
Phatr31975 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr31975" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr31975Predicted protein (397 aa)    
Predicted Functional Partners:
Phatr35766
Predicted protein (828 aa)
       
  0.560
Phatr20589
Predicted protein (434 aa)
     
   
  0.457
Phatr5236
Predicted protein (271 aa)
     
   
  0.451
Phatr42932
Predicted protein (1193 aa)
       
 
  0.451
Phatr5702
Predicted protein (227 aa)
           
  0.428
Phatr8694
Predicted protein (63 aa)
           
  0.426
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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