STRINGSTRING
dsCYC5 protein (Phaeodactylum tricornutum) - STRING interaction network
"dsCYC5" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsCYC5Predicted protein (297 aa)    
Predicted Functional Partners:
CDKA1
Predicted protein (290 aa)
     
  0.945
CDKA2
Predicted protein (298 aa)
     
  0.938
CYCB2
Predicted protein (64 aa)
     
  0.925
CYCD1
Predicted protein (222 aa)
     
  0.925
Phatr45416
Predicted protein (632 aa)
     
  0.924
CYCB1
Predicted protein (303 aa)
     
  0.915
Phatr44306
Predicted protein (865 aa)
     
  0.910
hCDK3
Predicted protein (295 aa)
     
  0.910
MYT1
Predicted protein (1108 aa)
     
  0.903
Phatr10628
Predicted protein (575 aa)
     
  0.896
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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