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STRINGSTRING
Phatr3262 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr3262" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr3262Predicted protein (220 aa)    
Predicted Functional Partners:
Phatr8975
Glycerol-3-phosphate dehydrogenase [NAD(+)] (350 aa)
     
 
  0.911
Phatr36821
Glycerol-3-phosphate dehydrogenase [NAD(+)] (386 aa)
     
 
  0.911
Phatr1129
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family (562 aa)
     
 
    0.900
GPT1
Glycerol-3-phosphate o-acyltransferase (551 aa)
     
 
  0.873
Phatr20460
Predicted protein; Belongs to the membrane-bound acyltransferase family (499 aa)
         
  0.861
Phatr13710
Predicted protein (350 aa)
     
   
  0.848
LPT1
1-acyl-sn-glycerol-3-phosphate acyltransferase (399 aa)
     
 
  0.845
Phatr42446
Predicted protein (315 aa)
     
 
  0.845
Phatr11916
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (144 aa)
     
 
  0.845
Phatr9794
Predicted protein; Belongs to the membrane-bound acyltransferase family (404 aa)
           
  0.799
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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