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STRINGSTRING
Phatr32661 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr32661" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr32661Predicted protein; Belongs to the Nudix hydrolase family (237 aa)    
Predicted Functional Partners:
Phatr34526
Predicted protein (440 aa)
            0.787
Phatr1690
Predicted protein (495 aa)
         
  0.509
Phatr48620
Predicted protein (645 aa)
   
   
  0.435
Phatr29887
Predicted protein (564 aa)
   
   
  0.432
Phatr17238
Anthranilate synthase (958 aa)
         
  0.418
GMD1
Gdp-mannose 4,6-dehydratase (363 aa)
   
   
  0.409
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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