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PGM_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"PGM_1" - Mutase phosphoglucomutase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGM_1Mutase phosphoglucomutase (600 aa)    
Predicted Functional Partners:
GPI_2
Glucose-6-phosphate isomerase (551 aa)
   
  0.994
Phatr54493
Udp-n-acetylglucosamine diphosphorylase (600 aa)
     
 
  0.948
Phatr5857
Predicted protein (186 aa)
   
  0.948
GPI_3
Glucose-6-phosphate isomerase (518 aa)
   
  0.948
GPI_1
Glucose-6-phosphate isomerase (554 aa)
   
  0.948
Tkl
Transketolase (664 aa)
   
 
  0.938
Phatr29260
Transketolase (684 aa)
   
 
  0.938
Phatr15495
Glucokinase (235 aa)
       
  0.933
Phatr39942
Predicted protein (301 aa)
     
 
    0.928
Phatr10546
Predicted protein (302 aa)
       
  0.920
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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