STRINGSTRING
Phatr32758 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr32758" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr32758Predicted protein (483 aa)    
Predicted Functional Partners:
Phatr51897
Predicted protein (531 aa)
     
      0.996
Phatr44242
Predicted protein (890 aa)
     
  0.989
Phatr45871
Predicted protein (944 aa)
     
  0.986
Phatr18258
Predicted protein (743 aa)
     
    0.986
Phatr25666
Predicted protein (885 aa)
     
  0.980
Phatr46837
Predicted protein (997 aa)
     
 
  0.979
Phatr45441
Predicted protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
  0.979
Phatr46994
Predicted protein (730 aa)
     
  0.975
BMS1
Ribosome biogenesis protein BMS1 (1096 aa)
     
  0.973
Phatr11703
Predicted protein (820 aa)
     
 
  0.971
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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