STRINGSTRING
Phatr33072 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr33072" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr33072Predicted protein (872 aa)    
Predicted Functional Partners:
Phatr45692
Predicted protein (700 aa)
     
  0.810
Phatr22703
Predicted protein (311 aa)
     
  0.810
Phatr47896
Predicted protein (1543 aa)
     
 
  0.778
Phatr18258
Predicted protein (743 aa)
     
    0.765
Phatr11703
Predicted protein (820 aa)
     
    0.728
Phatr23286
Predicted protein (274 aa)
     
  0.691
Phatr16766
Predicted protein (140 aa)
     
  0.691
Phatr12322
Predicted protein (212 aa)
     
  0.691
Phatr25666
Predicted protein (885 aa)
     
 
  0.680
Phatr42495
Predicted protein (1233 aa)
     
    0.673
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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