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Phatr33186 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr33186" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr33186Predicted protein (248 aa)    
Predicted Functional Partners:
Phatr13281
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (181 aa)
     
        0.958
Phatr30160
Predicted protein (104 aa)
     
      0.833
Phatr45356
Predicted protein (479 aa)
     
      0.809
Phatr19647
Predicted protein (354 aa)
     
        0.746
Phatr8777
Predicted protein (110 aa)
     
        0.721
Phatr45828
Predicted protein (805 aa)
     
   
  0.666
Phatr47526
Predicted protein (594 aa)
     
        0.656
Phatr43822
Predicted protein (341 aa)
     
        0.655
Phatr45871
Predicted protein (944 aa)
     
        0.654
Phatr14145
Predicted protein (516 aa)
     
        0.654
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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