STRINGSTRING
Trx-y protein (Phaeodactylum tricornutum) - STRING interaction network
"Trx-y" - Thioredoxin y in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trx-yThioredoxin y (178 aa)    
Predicted Functional Partners:
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
   
 
  0.964
Phatr24739
Predicted protein (1594 aa)
   
 
  0.964
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
   
 
  0.891
Trx-f
Thioredoxin f (107 aa)
   
  0.885
Phatr50084
Predicted protein (260 aa)
   
  0.866
Phatr14785
Predicted protein (176 aa)
   
  0.866
Phatr14192
Predicted protein (311 aa)
   
 
  0.844
Gsr_1
Glutathione-disulfide reductase (507 aa)
   
  0.784
Gsr_2
Glutathione reductase (496 aa)
   
  0.784
Phatr38534
Predicted protein (204 aa)
       
  0.776
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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