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STRINGSTRING
Trx-y protein (Phaeodactylum tricornutum) - STRING interaction network
"Trx-y" - Thioredoxin y in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trx-yThioredoxin y (178 aa)    
Predicted Functional Partners:
Trx-f
Thioredoxin f (107 aa)
   
 
  0.797
Phatr14192
Predicted protein; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family (311 aa)
   
 
  0.582
Gsr_2
Glutathione reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (496 aa)
   
 
  0.484
GLRXC2
Glutaredoxin (200 aa)
           
  0.483
Phatr12104
Predicted protein (106 aa)
   
 
  0.475
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
     
 
  0.463
Trx-o
Thioredoxin; Belongs to the thioredoxin family (106 aa)
   
 
 
  0.461
Phatr14885
Predicted protein (100 aa)
   
 
  0.432
Gsr_1
Glutathione-disulfide reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (507 aa)
   
 
  0.412
Trx-m
Thioredoxin m (91 aa)
   
          0.404
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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