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Phatr3351 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr3351" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr3351Predicted protein (281 aa)    
Predicted Functional Partners:
Phatr13820
Predicted protein (282 aa)
     
 
  0.988
Phatr9929
Predicted protein (196 aa)
     
 
  0.984
Phatr18258
Predicted protein (743 aa)
     
      0.984
Phatr45441
Predicted protein; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (379 aa)
     
 
  0.978
Phatr12144
Predicted protein (220 aa)
   
 
  0.972
Phatr12679
Predicted protein (290 aa)
     
      0.960
Phatr13281
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (181 aa)
     
   
  0.958
Phatr51897
Predicted protein (531 aa)
     
        0.958
Phatr21557
Predicted protein (348 aa)
     
        0.958
Phatr19647
Predicted protein (354 aa)
     
        0.958
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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