• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr34027 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34027" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34027Predicted protein (267 aa)    
Predicted Functional Partners:
Phatr10852
Predicted protein; Belongs to the sterol desaturase family (167 aa)
     
 
  0.546
PHATR_645
Terpene cyclase/mutase family member; Acetyl-coenzyme A synthetase; Belongs to the terpene cyclase/mutase family (678 aa)
   
 
  0.504
Phatr54983
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.491
Phatr17427
Predicted protein (695 aa)
   
   
  0.488
Phatr14208
Predicted protein; Belongs to the sterol desaturase family (249 aa)
     
 
  0.486
Phatr31339
Predicted protein; Belongs to the cytochrome P450 family (482 aa)
     
 
  0.435
Phatr16649
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase (461 aa)
   
 
  0.432
Phatr31684
Predicted protein (231 aa)
   
          0.431
Phatr49495
Predicted protein; Belongs to the cytochrome b5 family (288 aa)
       
 
  0.424
Phatr48260
Predicted protein (467 aa)
     
 
  0.415
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (11%) [HD]