STRINGSTRING
Phatr34441 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34441" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34441Predicted protein (286 aa)    
Predicted Functional Partners:
GPT1
Glycerol-3-phosphate o-acyltransferase (551 aa)
       
  0.719
Phatr10054
Predicted protein (259 aa)
         
  0.557
Phatr43773
Predicted protein (398 aa)
       
 
  0.524
Phatr8860
Annotation not available (577 aa)
       
 
  0.497
Phatr49702
Predicted protein (959 aa)
       
 
  0.497
Phatr40261
Predicted protein (311 aa)
     
 
  0.464
Phatr8658
Predicted protein (195 aa)
       
 
  0.446
Phatr43439
Predicted protein (398 aa)
       
 
  0.446
Phatr15563
Predicted protein (224 aa)
       
 
  0.446
Phatr14327
Predicted protein (199 aa)
       
 
  0.446
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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