STRINGSTRING
Phatr34457 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34457" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34457Predicted protein (1060 aa)    
Predicted Functional Partners:
Phatr16786
Predicted protein (716 aa)
     
 
  0.787
Phatr55230
Predicted protein (709 aa)
     
 
  0.576
HSP90
Heat shock protein Hsp90 (780 aa)
     
 
  0.576
Phatr18793
Predicted protein (750 aa)
     
 
  0.576
Phatrdraft7
Predicted protein (721 aa)
       
 
  0.514
Phatrdraft29
Predicted protein (746 aa)
       
 
  0.514
myoA3
Predicted protein (1027 aa)
       
 
  0.514
myoA1
Predicted protein (867 aa)
       
 
  0.514
myoC3
Predicted protein (932 aa)
       
 
  0.514
myoA4
Predicted protein (867 aa)
       
 
  0.514
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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