STRINGSTRING
Phatr34582 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34582" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34582Predicted protein (334 aa)    
Predicted Functional Partners:
Phatr22909
Predicted protein (443 aa)
 
   
  0.973
Phatr21592
Diaminopimelate decarboxylase (481 aa)
   
 
  0.970
Phatr24195
CPS III, carbamoyl-phosphate synthase mitochindrial (1463 aa)
       
  0.893
CPS-II
Predicted protein (1542 aa)
       
  0.832
Phatr22113
Bifunctional aspartokinase (870 aa)
       
  0.748
ODC3
Ornithine decarboxylase (564 aa)
   
 
  0.720
Phatr2834
Predicted protein (392 aa)
   
 
  0.720
ODC2
Ornithine decarboxylase (390 aa)
   
 
  0.720
Phatr11151
Predicted protein (292 aa)
 
     
  0.705
GltX
Ferredoxin-dependent glutamate synthase, fusion of large and small subunits (1591 aa)
         
  0.677
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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