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Phatr34610 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34610" - N-acetylglucosaminyl phosphatidylinositol deacetylase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34610N-acetylglucosaminyl phosphatidylinositol deacetylase (267 aa)    
Predicted Functional Partners:
Phatr43101
Predicted protein (330 aa)
     
 
  0.989
GWT1
Predicted protein (445 aa)
     
 
  0.987
Phatr54068
N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein (450 aa)
   
 
  0.962
Phatr52551
Predicted protein (600 aa)
     
   
  0.910
Phatr18303
Mannosyl transferase (487 aa)
     
   
  0.908
Phatr44790
Mannosyltransferase (586 aa)
           
  0.896
Phatrdraft1666
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (558 aa)
           
  0.887
Phatr47390
Predicted protein (668 aa)
   
   
  0.885
Phatr30638
Predicted protein (294 aa)
     
   
  0.812
Phatr23292
L-galactono-1,4-lactone dehydrogenase (572 aa)
           
  0.797
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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