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Phatr34747 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34747" - N-(5'-phosphoribosyl)anthranilate isomerase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34747N-(5’-phosphoribosyl)anthranilate isomerase (297 aa)    
Predicted Functional Partners:
Phatr11527
Predicted protein (172 aa)
 
  0.992
Phatr41702
Predicted protein (671 aa)
 
 
  0.985
Phatrdraft1682
Anthranilate synthase (927 aa)
 
 
  0.959
Phatr17238
Anthranilate synthase (958 aa)
 
  0.956
Phatrdraft595
Predicted protein (233 aa)
 
  0.915
Phatr28937
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
 
 
  0.895
Phatr14230
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
 
 
  0.895
Phatr48186
Predicted protein (992 aa)
     
  0.877
TRPB
Tryptophan synthase, beta chain (385 aa)
 
 
  0.852
Phatrdraft592
Predicted protein (340 aa)
 
 
  0.810
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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