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STRINGSTRING
Phatr34898 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34898" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34898Predicted protein (257 aa)    
Predicted Functional Partners:
Phatr11740
Predicted protein (229 aa)
   
  0.957
Phatr15948
Predicted protein (262 aa)
   
  0.931
Phatrdraft1367
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors (245 aa)
     
  0.925
Phatr6457
Predicted protein; Belongs to the adenylate kinase family (196 aa)
     
  0.925
Phatr9308
Predicted protein (310 aa)
         
  0.904
Phatr9211
Predicted protein (310 aa)
         
  0.904
Phatr14301
Predicted protein (327 aa)
     
 
  0.903
Phatr26336
Predicted protein (179 aa)
 
   
 
0.839
Phatr1690
Predicted protein (495 aa)
   
   
  0.782
Phatr42619
Predicted protein (494 aa)
 
   
  0.734
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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