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Phatr34920 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr34920" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr34920Predicted protein (275 aa)    
Predicted Functional Partners:
Phatr19324
Predicted protein (554 aa)
   
 
  0.914
Phatr47361
Predicted protein (489 aa)
   
 
  0.793
Phatr43711
Predicted protein (580 aa)
   
 
  0.793
PHATR_3140
Predicted protein (196 aa)
   
   
  0.778
Phatr12645
Predicted protein (199 aa)
       
 
  0.740
Phatr9654
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine (347 aa)
   
 
  0.667
Phatr38891
Predicted protein (373 aa)
   
 
  0.640
Phatr49149
Predicted protein (570 aa)
     
  0.623
PHATR_2432
Predicted protein (305 aa)
     
 
  0.622
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
       
  0.590
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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