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STRINGSTRING
Phatr35057 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr35057" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr35057Predicted protein (294 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
   
 
  0.997
Phatr17238
Anthranilate synthase (958 aa)
   
 
  0.956
Phatr28937
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
   
   
  0.555
Phatr14230
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
   
   
  0.555
TRPB
Tryptophan synthase, beta chain (385 aa)
   
   
  0.531
Phatr47067
Predicted protein (1237 aa)
   
   
  0.517
Phatr34747
Predicted protein; N-(5’-phosphoribosyl)anthranilate isomerase (297 aa)
   
 
  0.512
Phatr19324
Predicted protein; Belongs to the HisA/HisF family (554 aa)
   
   
  0.490
Phatrdraft595
Predicted protein (233 aa)
   
 
  0.411
Phatrdraft592
Predicted protein (340 aa)
   
 
  0.411
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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