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STRINGSTRING
Phatr35318 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr35318" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr35318Predicted protein (327 aa)    
Predicted Functional Partners:
Phatr16182
Predicted protein; Belongs to the AAA ATPase family (514 aa)
     
   
  0.807
Phatr14756
Predicted protein (308 aa)
     
   
  0.798
Phatr48717
Predicted protein (687 aa)
           
  0.765
Phatr43673
Predicted protein (304 aa)
           
  0.765
Phatr3171
Predicted protein (220 aa)
     
   
  0.757
Phatr8096
Predicted protein (67 aa)
     
 
  0.724
Phatr45953
Predicted protein (857 aa)
     
 
  0.689
Phatrdraft218
Predicted protein (125 aa)
     
   
  0.641
DYN1
Predicted protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (742 aa)
     
 
  0.630
Phatr21455
Predicted protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (815 aa)
     
 
  0.630
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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