STRINGSTRING
Phatr35594 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr35594" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr35594Predicted protein (512 aa)    
Predicted Functional Partners:
Phatr22113
Bifunctional aspartokinase (870 aa)
   
  0.992
Phatr46461
Predicted protein (426 aa)
 
 
  0.989
Phatr48694
Homoserine dehydrogenase (437 aa)
   
  0.985
Phatr26813
Homoserine dehydrogenase (456 aa)
   
  0.985
Phatr52316
Aspartokinase (468 aa)
   
 
  0.846
Phatr10757
Predicted protein (345 aa)
   
 
  0.841
Phatr41702
Predicted protein (671 aa)
     
   
  0.743
Phatr24772
Predicted protein (801 aa)
   
   
  0.715
P5CS
Delta l-pyrroline-5-carboxylate synthetase (747 aa)
   
   
  0.712
Phatr18027
Predicted protein (706 aa)
   
   
  0.712
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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