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Phatr35643 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr35643" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr35643Predicted protein (337 aa)    
Predicted Functional Partners:
Phatr38509
Predicted protein (301 aa)
       
  0.941
Phatr5156
Predicted protein (188 aa)
         
    0.916
Phatr4950
Predicted protein (193 aa)
         
    0.916
Phatr48891
Putative uncharacterized protein (427 aa)
         
    0.916
Phatr38694
Predicted protein (348 aa)
         
    0.916
Phatr13557
Proly 4-hydroxylase (226 aa)
         
    0.916
Phatr10655
Predicted protein (230 aa)
         
    0.916
ODC2
Ornithine decarboxylase (390 aa)
   
 
  0.911
Phatr25379
Pyrroline-5-carboxylate reductase (289 aa)
       
  0.910
OAT
Ornithine aminotransferase (448 aa)
       
  0.909
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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