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Phatr36081 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr36081" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr36081Predicted protein (358 aa)    
Predicted Functional Partners:
Phatr5532
Predicted protein (238 aa)
   
 
  0.861
Phatr50510
Predicted protein (647 aa)
   
 
  0.861
Phatr29793
Predicted protein (424 aa)
   
 
  0.861
Phatr12985
Predicted protein (132 aa)
     
  0.685
Phatr14915
Predicted protein (200 aa)
   
  0.641
Phatr9894
Predicted protein (140 aa)
   
 
  0.634
Phatr17519
Predicted protein (143 aa)
   
 
  0.623
Phatr14713
Predicted protein (137 aa)
   
 
  0.618
Phatr21873
Predicted protein (406 aa)
   
0.615
Phatr25375
Predicted protein (201 aa)
   
 
  0.606
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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