Full Link:
STRINGSTRING
Fum protein (Phaeodactylum tricornutum) - STRING interaction network
Fumarate hydratase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FumFumarate hydratase (462 aa)    
Predicted Functional Partners:
MDH
Predicted protein (324 aa)
   
  0.986
FUM1
Precursor of fumarase fumarase (567 aa)
   
 
  0.976
SDH1
Succinate dehydrogenase flavoprotein; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (638 aa)
   
  0.974
SDH2
Succinate dehydrogenase iron sulfur protein; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q) (273 aa)
   
  0.969
ME1
Malic enzyme (560 aa)
   
  0.963
Phatr51970
Malic enzyme (555 aa)
   
  0.961
Phatr30145
Citrate synthase (471 aa)
   
 
  0.937
MS
Malate synthase (553 aa)
       
  0.928
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.906
Phatr10356
Succinate dehydrogenase cytochrome b subunit (125 aa)
         
    0.900
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (4%)