STRINGSTRING
Phatr36165 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr36165" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr36165Predicted protein (448 aa)    
Predicted Functional Partners:
Phatr19762
Predicted protein (807 aa)
       
  0.923
Phatr21296
Biotin synthase (437 aa)
   
  0.877
Phatr19427
Predicted protein (445 aa)
 
  0.840
Phatr44984
Predicted protein (552 aa)
   
 
  0.739
Phatr48864
Reductase with NAD or NADP as acceptor (395 aa)
       
  0.702
Phatr54974
Hydrolase (494 aa)
   
  0.655
Phatr50641
Predicted protein (463 aa)
     
  0.651
Phatr48133
Predicted protein (360 aa)
     
  0.651
Phatr47448
Predicted protein (692 aa)
     
  0.651
Phatr45728
Predicted protein (331 aa)
     
  0.651
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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