STRINGSTRING
Phatr36256 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr36256" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr36256Predicted protein (401 aa)    
Predicted Functional Partners:
Phatr48580
Predicted protein (476 aa)
   
  0.889
SKT1
Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (511 aa)
         
  0.740
Phatr36257
Phosphoketolase (835 aa)
     
  0.734
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.665
Phatr44982
Predicted protein (203 aa)
       
  0.577
Phatrdraft645
Acetyl-coenzyme A synthetase (732 aa)
   
 
  0.554
Phatr22974
Acetate-coa, ligase (675 aa)
   
 
  0.554
Phatr14412
Predicted protein (298 aa)
         
  0.533
Phatr14212
Predicted protein (308 aa)
         
  0.533
FAO1
Peroxisomal bifunctional enzyme (767 aa)
         
  0.498
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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