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Phatr36257 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr36257" - Phosphoketolase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr36257Phosphoketolase (835 aa)    
Predicted Functional Partners:
Phatr36256
Predicted protein (401 aa)
     
  0.734
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
       
  0.597
GOX
Glycolate oxidase (381 aa)
     
   
  0.505
PSAT
Phosphoserine transaminase (409 aa)
           
  0.477
Phatr31650
Solute carrier (590 aa)
           
  0.474
Phatr48580
Predicted protein (476 aa)
   
 
  0.447
Phatr28222
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (316 aa)
       
  0.442
FSA
Aldolase fructose-6-phosphate-aldolase (266 aa)
       
  0.442
TAL
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (348 aa)
       
  0.442
Phatr27735
Predicted protein (538 aa)
         
  0.436
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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