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STRINGSTRING
Phatr36398 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr36398" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr36398Predicted protein (386 aa)    
Predicted Functional Partners:
Phatr38930
Predicted protein (307 aa)
   
  0.991
Phatr21116
Predicted protein; Argininosuccinate synthase (418 aa)
   
   
  0.607
Phatr18404
Predicted protein (512 aa)
         
  0.595
Phatr24238
Carbamate kinase; Belongs to the carbamate kinase family (336 aa)
         
  0.583
Phatr15536
Predicted protein (313 aa)
       
  0.501
Phatr48350
Predicted protein (1773 aa)
         
  0.451
Phatr54969
Aliphatic amidase (357 aa)
         
  0.438
Phatr45451
Formamidase (342 aa)
         
  0.438
Phatr40880
Agmatinase; Belongs to the arginase family (416 aa)
           
  0.414
Phatr3362
Predicted protein (322 aa)
           
  0.410
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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