STRINGSTRING
Phatr36485 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr36485" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr36485Predicted protein (112 aa)    
Predicted Functional Partners:
Phatr50622
Predicted protein (353 aa)
       
  0.410
Phatr50621
Predicted protein (420 aa)
       
  0.410
Phatr49620
Predicted protein (280 aa)
       
  0.410
Phatr49596
Predicted protein (333 aa)
       
  0.410
Phatr49566
Predicted protein (424 aa)
       
  0.410
Phatr49557
Predicted protein (400 aa)
       
  0.410
Phatr49147
Predicted protein (366 aa)
       
  0.410
Phatr49136
Predicted protein (433 aa)
       
  0.410
Phatr48667
Predicted protein (373 aa)
       
  0.410
Phatr48558
Predicted protein (468 aa)
       
  0.410
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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