STRINGSTRING
Phatr3687 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr3687" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr3687Predicted protein (239 aa)    
Predicted Functional Partners:
Phatr16688
Predicted protein (414 aa)
     
  0.993
Phatr11894
Predicted protein (209 aa)
     
   
  0.758
Phatr51897
Predicted protein (531 aa)
     
        0.717
Phatr38893
Predicted protein (174 aa)
 
            0.694
Phatr25666
Predicted protein (885 aa)
     
   
  0.655
Phatr44047
Predicted protein (463 aa)
     
        0.655
Phatr45828
Predicted protein (805 aa)
     
        0.646
Phatr11703
Predicted protein (820 aa)
     
        0.645
Phatr9893
Predicted protein (455 aa)
     
        0.639
Phatr46994
Predicted protein (730 aa)
     
        0.638
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (4%) [HD]