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STRINGSTRING
Phatr36927 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr36927" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr36927Predicted protein (409 aa)    
Predicted Functional Partners:
Phatr8777
Predicted protein (110 aa)
     
 
  0.996
Phatr21538
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA (256 aa)
     
 
  0.991
Phatr45356
Predicted protein (479 aa)
     
 
  0.990
Phatr30960
Protein MAK16 homolog; Belongs to the MAK16 family (313 aa)
     
      0.989
Phatr43822
Predicted protein (341 aa)
     
 
  0.988
Phatr27905
Predicted protein (418 aa)
     
 
  0.985
Phatr8457
Predicted protein (59 aa)
     
      0.976
SAS1
Regulator of chromatin silencing (624 aa)
     
        0.974
Phatr49433
Predicted protein (705 aa)
     
        0.974
Phatr44687
Predicted protein (426 aa)
     
        0.974
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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