STRINGSTRING
Phatr37077 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr37077" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr37077Predicted protein (222 aa)    
Predicted Functional Partners:
Phatr28433
Ubiquitin carrier protein (167 aa)
       
0.878
hUbc6
Predicted protein (142 aa)
       
0.873
Phatr11653
Predicted protein (174 aa)
     
      0.614
Phatr30092
Predicted protein (147 aa)
       
  0.478
UBC1
Ubiquitin carrier protein (197 aa)
       
0.455
Phatr47503
Predicted protein (670 aa)
       
  0.453
Phatr37731
Predicted protein (1373 aa)
       
  0.453
Phatr42799
Predicted protein (1343 aa)
       
 
  0.438
Phatr43773
Predicted protein (398 aa)
       
      0.434
hHrd1
Predicted protein (632 aa)
       
 
  0.401
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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