STRINGSTRING
Phatr37144 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr37144" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr37144Predicted protein (118 aa)    
Predicted Functional Partners:
Phatr47388
Predicted protein (1057 aa)
       
 
  0.647
Phatr43459
Splicing coactivator subunit-like protein (490 aa)
       
      0.576
Phatr12990
Predicted protein (500 aa)
       
      0.560
Phatr10199
Predicted protein (203 aa)
       
 
  0.510
Phatr10583
Predicted protein (94 aa)
     
        0.499
Phatr9806
Predicted protein (195 aa)
       
      0.463
Phatr14767
Predicted protein (143 aa)
       
      0.463
Phatr13834
Predicted protein (172 aa)
       
 
  0.432
Phatr232
Predicted protein (986 aa)
       
      0.428
Phatr8270
Predicted protein (84 aa)
       
 
  0.421
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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