Full Link:
STRINGSTRING
Phatr37272 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr37272" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr37272Predicted protein (351 aa)    
Predicted Functional Partners:
Phatr18239
Predicted protein (1058 aa)
     
  0.858
Phatr11409
Predicted protein (160 aa)
       
  0.772
Phatr45431
Predicted protein (1158 aa)
     
  0.741
Phatr10199
Predicted protein (203 aa)
       
  0.621
RPA1
Replication protein a large 70 kD subunit (606 aa)
     
 
  0.588
H2A-m1
Histone H2A (138 aa)
     
  0.554
RpoT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (576 aa)
         
  0.537
Phatr47992
Predicted protein (432 aa)
       
  0.525
Phatr51604
Predicted protein (509 aa)
     
  0.524
Phatr47011
Predicted protein (1431 aa)
     
  0.524
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%)