STRINGSTRING
Phatr3730 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr3730" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr3730Predicted protein (300 aa)    
Predicted Functional Partners:
Phatr5235
Predicted protein (263 aa)
 
 
  0.955
Phatr3120
Predicted protein (241 aa)
 
 
  0.955
Phatr12655
Predicted protein (260 aa)
 
 
  0.955
Phatr11563
Predicted protein (238 aa)
 
 
  0.955
Phatr10848
Predicted protein (261 aa)
 
 
  0.955
Phatr48350
Predicted protein (1773 aa)
     
  0.944
Phatr47992
Predicted protein (432 aa)
     
  0.852
Phatr11631
Predicted protein (300 aa)
   
0.834
Phatr10865
Predicted protein (323 aa)
   
0.834
Phatrdraft1636
Predicted protein (737 aa)
     
  0.822
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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