STRINGSTRING
Phatr37341 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr37341" - Annotation not available in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr37341Annotation not available (628 aa)    
Predicted Functional Partners:
Phatr30967
Predicted protein (539 aa)
 
 
  0.986
Phatrdraft877
L-serine ammonia-lyase (340 aa)
   
  0.968
Phatr19518
Predicted protein (479 aa)
   
  0.968
Phatr44618
2-isopropylmalate synthase (663 aa)
 
 
  0.948
Phatr38362
2-isopropylmalate synthase (581 aa)
 
 
  0.930
PK6
Pyruvate kinase (553 aa)
       
  0.900
PK3
Pyruvate kinase (543 aa)
       
  0.900
PK2
Pyruvate kinase (513 aa)
       
  0.900
PK5
Pyruvate kinase (543 aa)
       
  0.900
Phatr20547
Homeobox protein (646 aa)
 
 
  0.885
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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