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Phatr37572 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr37572" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr37572Predicted protein (977 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
       
  0.763
Phatr47293
Predicted protein (580 aa)
       
  0.697
Phatr16445
Predicted protein (365 aa)
       
  0.587
GapC2a
Glyceraldehyde-3-phosphate dehydrogenase (334 aa)
       
  0.539
GapC4
Predicted protein (336 aa)
       
  0.539
Phatr29456
Glyceraldehyde-3-phosphate dehydrogenase (334 aa)
       
  0.539
GAPDH_3
Predicted protein (351 aa)
       
  0.539
GapC1
Glyceraldehyde-3-phosphate dehydrogenase (379 aa)
       
  0.539
Phatrdraft1572
Enolase (464 aa)
   
 
  0.532
Phatrdraft1192
Annotation not available (457 aa)
   
 
  0.532
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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