STRINGSTRING
Phatr37959 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr37959" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr37959Predicted protein (311 aa)    
Predicted Functional Partners:
Phatr44529
Predicted protein (360 aa)
   
        0.576
Phatr16334
Predicted protein (223 aa)
   
        0.566
FtrB
Reductase of ferredoxin thioredoxin reductase (121 aa)
   
        0.559
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
   
  0.551
Phatr11792
Predicted protein (278 aa)
   
        0.548
Phatr46071
Predicted protein (180 aa)
   
        0.539
Phatr48524
Predicted protein (300 aa)
   
        0.539
Phatr9078
Predicted protein (105 aa)
   
   
  0.532
Phatr26293
Photosystem II 12 kDa extrinsic protein, chloroplastic (148 aa)
   
     
  0.522
Phatr3527
Predicted protein (233 aa)
   
          0.512
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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