STRINGSTRING
Phatr38261 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr38261" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr38261Predicted protein (406 aa)    
Predicted Functional Partners:
Phatr19901
Predicted protein (900 aa)
   
   
  0.784
Phatr14535
Predicted protein (102 aa)
   
   
  0.719
Phatr11032
Predicted protein (115 aa)
   
   
  0.719
Phatr5769
Predicted protein (190 aa)
   
   
  0.693
Phatr43162
Predicted protein (146 aa)
   
   
  0.693
Phatr10774
Predicted protein (167 aa)
   
   
  0.693
Phatr9554
Predicted protein (78 aa)
   
   
  0.688
Phatr8024
Predicted protein (112 aa)
   
   
  0.688
Phatr33660
Predicted protein (253 aa)
   
   
  0.688
Phatr29177
Predicted protein (185 aa)
   
   
  0.688
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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