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STRINGSTRING
Phatr38525 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr38525" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr38525Predicted protein (665 aa)    
Predicted Functional Partners:
Phatr44426
Predicted protein (638 aa)
     
   
  0.889
Phatr31339
Predicted protein; Belongs to the cytochrome P450 family (482 aa)
           
  0.694
Phatr33524
Predicted protein (156 aa)
     
   
  0.664
Phatr12516
Predicted protein (147 aa)
     
   
  0.605
Phatr27735
Predicted protein (538 aa)
           
  0.577
Phatr16987
Predicted protein; Belongs to the DEAD box helicase family (404 aa)
     
      0.571
PHATR_7736
Predicted protein (122 aa)
           
  0.446
Phatr54743
Predicted protein (347 aa)
     
   
  0.435
AOX1
Precursor of oxidase acyl-coa oxidase; Belongs to the acyl-CoA oxidase family (706 aa)
       
      0.420
Phatr20335
Predicted protein (665 aa)
     
   
  0.412
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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