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STRINGSTRING
Phatr38534 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr38534" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr38534Predicted protein (204 aa)    
Predicted Functional Partners:
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
     
 
  0.729
Phatr15852
Predicted protein (138 aa)
   
 
  0.653
Phatr17427
Predicted protein (695 aa)
     
   
  0.616
Phatr32791
Predicted protein (191 aa)
     
 
  0.601
Phatr50084
Predicted protein (260 aa)
     
 
  0.600
Phatr14785
Predicted protein (176 aa)
     
 
  0.600
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
     
 
  0.553
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
     
 
  0.553
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
     
 
  0.482
Gsr_1
Glutathione-disulfide reductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (507 aa)
   
   
  0.470
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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