STRINGSTRING
Phatr38642 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr38642" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr38642Predicted protein (587 aa)    
Predicted Functional Partners:
Phatr4593
Predicted protein (182 aa)
     
 
  0.588
Phatr19821
Predicted protein; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NUBP1-NUBP2 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins (368 aa)
     
 
  0.588
Phatr16719
Predicted protein (182 aa)
     
 
  0.588
PHATR_1494
Predicted protein (438 aa)
     
 
  0.588
Phatr4342
Predicted protein (310 aa)
       
 
  0.539
Phatr7780
Predicted protein (122 aa)
   
   
  0.516
Phatr42768
Predicted protein (599 aa)
       
 
  0.490
Phatr3366
Predicted protein (225 aa)
       
 
  0.490
Phatr13383
Predicted protein (164 aa)
       
 
  0.490
Phatr12620
Predicted protein (532 aa)
       
 
  0.490
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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