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STRINGSTRING
Phatr38642 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr38642" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr38642Predicted protein (587 aa)    
Predicted Functional Partners:
Phatr4342
Predicted protein; Belongs to the mitochondrial carrier (TC 2.A.29) family (310 aa)
       
 
  0.916
Phatr26952
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (421 aa)
     
 
  0.914
IscU
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
     
 
  0.910
Phatr14927
Predicted protein (87 aa)
     
   
  0.910
Phatr48846
Predicted protein; Belongs to the NARF family (627 aa)
     
   
  0.907
Phatr45164
Predicted protein (657 aa)
           
  0.880
Phatr45826
Predicted protein (238 aa)
     
 
  0.836
Phatr47020
Anamorsin homolog; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (306 aa)
     
   
  0.801
Phatr21354
Predicted protein (422 aa)
           
  0.800
Phatr9020
Predicted protein (364 aa)
     
   
  0.792
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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