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Phatr38963 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr38963" - D-tyrosyl-tRNA(Tyr) deacylase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr38963D-tyrosyl-tRNA(Tyr) deacylase (167 aa)    
Predicted Functional Partners:
Phatr27323
Predicted protein (488 aa)
   
   
  0.594
Phatr25204
Predicted protein (598 aa)
         
  0.427
Phatr11722
Predicted protein (354 aa)
   
   
  0.407
Phatr23920
Predicted protein (503 aa)
     
      0.403
Phatr16944
Predicted protein (438 aa)
     
      0.403
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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