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Phatr39151 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr39151" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr39151Predicted protein; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis (481 aa)    
Predicted Functional Partners:
Phatr15948
Predicted protein (262 aa)
       
  0.654
Phatr34898
Predicted protein (257 aa)
       
  0.596
Phatr26336
Predicted protein (179 aa)
       
  0.596
Phatr52603
Predicted protein (597 aa)
       
  0.552
Phatr48819
Predicted protein (681 aa)
       
  0.552
PGM_2
Phosphoglucomutase (528 aa)
       
  0.552
Phatr47067
Predicted protein (1237 aa)
         
  0.493
Phatr1690
Predicted protein (495 aa)
         
  0.491
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase (614 aa)
     
 
  0.488
Phatr31718
Inosine-5’-monophosphate dehydrogenase (468 aa)
         
  0.484
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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