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HAD2 protein (Phaeodactylum tricornutum) - STRING interaction network
"HAD2" - 3-hydroxyacyl-coenzyme A dehydrogenase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAD23-hydroxyacyl-coenzyme A dehydrogenase (329 aa)    
Predicted Functional Partners:
Phatr55192
Hydratase enyol-coa hydratase (269 aa)
  0.996
KCT1
Beta-ketoacyl-coa thiolase (386 aa)
  0.995
KCT3
Beta-ketoacyl-CoA thiolase (457 aa)
  0.994
Phatr45947
Predicted protein (403 aa)
 
  0.991
Phatr23913
Acetyl-coa c-acetyltransferase (396 aa)
 
  0.990
Phatr11811
Enoyl-coa hydratase (203 aa)
  0.974
Phatr54528
Enoyl-coa hydratase; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite (385 aa)
   
  0.972
Phatr35240
Predicted protein (684 aa)
 
0.967
SKT1
Succinyl-coenzyme A-3-oxo-acid coenzyme a-transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate (511 aa)
   
 
  0.951
Phatr23467
Dehydrogenase methylmalonate-semialdhyde dehydrogenase (537 aa)
 
 
 
  0.917
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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