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STRINGSTRING
Phatr39914 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr39914" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr39914Predicted protein (418 aa)    
Predicted Functional Partners:
Phatrdraft913
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (386 aa)
   
   
  0.645
Phatr28056
Predicted protein (757 aa)
   
   
  0.638
Phatr18319
Adenosylhomocysteinase (481 aa)
   
   
  0.626
Phatr1690
Predicted protein (495 aa)
         
  0.610
Phatr19901
Predicted protein (900 aa)
   
   
  0.575
Phatr51830
Methylmalonyl-coa mutase (719 aa)
           
  0.569
GLXI
Lactyolglutathione lyase (310 aa)
           
  0.487
Phatr30471
Predicted protein; Methylenetetrahydrofolate reductase (376 aa)
   
 
  0.430
Phatr28431
Methylenetetrahydrofolate reductase (634 aa)
   
 
  0.430
Phatr16499
Predicted protein (378 aa)
   
   
  0.417
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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