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Phatr39942 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr39942" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr39942Predicted protein (301 aa)    
Predicted Functional Partners:
Phatr15495
Glucokinase (235 aa)
       
    0.932
GPI_2
Glucose-6-phosphate isomerase (551 aa)
       
  0.929
UGP/PGM
UDP-Glucose-Pyrophosphorylase/Phosphoglucomutase (629 aa)
     
 
    0.928
PGM_1
Mutase phosphoglucomutase (600 aa)
     
 
    0.928
PGM_2
Phosphoglucomutase (528 aa)
         
    0.921
Phatr41298
Annotation not available (228 aa)
         
    0.900
FbaC1
Fructose-bisphosphate aldolase (402 aa)
         
    0.800
Fba4
Cytosolic aldolase (299 aa)
         
    0.800
Tkl
Transketolase (664 aa)
         
    0.800
FbaC5
Fructose-bisphosphate aldolase (358 aa)
         
    0.800
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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